Allelic heterogeneity of molecular events in human coagulation factor IX in Asian Indians Mutation in brief. Mahajan A, Chavali S, Ghosh S, Kabra M, Chowdhury MR, Indian Genome Variation Consortium, Bharadwaj D. Hum Mutat. (2007) 28(5): 526
Molecular diagnosis of Wilson disease using prevalent mutations and informative single-nucleotide polymorphism markers. Gupta A, Maulik M, Nasipuri P, Chattopadhyay I, Das SK, Gangopadhyay PK, Indian Genome Variation Consortium, Ray K. Clin Chem. (2007) 53(9): 1601-8
Parkin polymorphisms: risk for Parkinson's disease in Indian population. Biswas A, Maulik M, Das SK, Indian Genome Variation Consortium, Ray K, Ray J. Clin Genet. (2007) 72(5): 484-6
Evaluation of genetic markers linked to hemophilia A locus: an Indian experience. Saha A, Mukherjee S, Maulik M, Chandak GR, Indian Genome Variation Consortium, Ray K. Haematologica (2007) 92 (12): 1725-6
Polymorphisms of TNF-enhancer and gene for FcgammaRIIa correlate with the severity of falciparum malaria in the ethnically diverse Indian population. Sinha S, Mishra SK, Sharma S, Patibandla PK, Mallick PK, Sharma SK, Mohanty S, Pati SS, Mishra SK, Ramteke BK, Bhatt R, Joshi H, Dash AP, Ahuja RC, Awasthi S, Indian Genome Variation Consortium, Venkatesh V, Habib S. Malar J. (2008) 7:13
Bhattacharjee A, Banerjee D, Mookherjee S, Acharya M, Banerjee A, Ray A, Sen A, Indian Genome Variation Consortium, Ray K. Leu432Val polymorphism in CYP1B1 as a susceptible factor towards predisposition to primary open-angle glaucoma. Mol Vis. (2008) 14: 841-50
Variations in host genes encoding adhesion molecules and susceptibility to falciparum malaria in India. Sinha S, Qidwai T, Kanchan K, Anand P, Jha GN, Pati SS, Mohanty S, Mishra SK, Tyagi PK, Sharma SK, Indian Genome Variation Consortium, Venkatesh V, Habib S. Malar J. (2008) 7: 250
Utilizing linkage disequilibrium information from Indian Genome Variation Database for mapping mutations: SCA12 case study. Bahl S, Ahmed I, Indian Genome Variation Consortium, Mukerji M. J Genet. (2009) 88(1): 55-60
Genetic differentiation of populations residing in areas of high malaria endemicity in India. Sinha S, Arya V, Agarwal S, Indian Genome Variation Consortium, Habib S. J Genet. (2009) 88 (1): 77-80
Single nucleotide polymorphisms in homocysteine metabolism pathway genes: association of CHDH A119C and MTHFR C677T with hyperhomocysteinemia. Kumar J, Garg G, Kumar A, Sundaramoorthy E, Sanapala KR, Ghosh S, Karthikeyan G, Ramakrishnan L, Indian Genome Variation Consortium, Sengupta S. Circ Cardiovasc Genet. (2009) 2(6): 599-606
Evaluation of PINK1 variants in Indian Parkinson's disease patients. Biswas A, Sadhukhan T, Majumder S, Misra AK, Das SK, Indian Genome Variation Consortium IG, Ray K, Ray J. Parkinsonism Relat Disord. (2010) 16(3): 167-71
Analysis of single nucleotide polymorphisms of PRNP gene in twenty-four ethnic groups of India. Sengupta M, Chakraborty A, Indian Genome Variation Consortium, Ray K. J Genet. (2010) 89(2): 247-51
IGVBrowser--a genomic variation resource from diverse Indian populations. Narang A, Roy RD, Chaurasia A, Mukhopadhyay A, Mukerji M, Indian Genome Variation Consortium, Dash D. Database (Oxford). (2010): 2010:baq022
EGLN1 involvement in high-altitude adaptation revealed through genetic analysis of extreme constitution types defined in Ayurveda. Aggarwal S, Negi S, Jha P, Singh PK, Stobdan T, Pasha MA, Ghosh S, Agrawal A, Indian Genome Variation Consortium, Prasher B, Mukerji M. Proc Natl Acad Sci USA (2010) 107(44): 18961-6
Molecular and functional studies of tyrosinase variants among Indian oculocutaneous albinism type 1 patients. Chaki M, Sengupta M, Mondal M, Bhattacharya A, Mallick S, Bhadra R, Indian Genome Variation Consortium, Ray K. J Invest Dermatol. (2011) 131(1): 260-2
A set of five microsatellite markers linked to F8 gene can detect haemophilia A carriers across India. Saha A, Nayak S, Mani KR, Chandak GR, Indian Genome Variation Consortium, Ray K, Mukhopadhyay A. Haemophilia (2011) 17(5): e928-935
Differential serum cytokine levels are associated with cytokine gene polymorphisms in north Indians with active pulmonary tuberculosis. Abhimanyu, Mangangcha IR, Jha P, Arora K, Mukerji M, Banavaliker JN, Indian Genome Variation Consortium, Brahmachari V, Bose M. Infect Genet Evol. (2011) 11(5): 1015-22
Spectrum of large copy number variations in 26 diverse Indian populations: potential involvement in phenotypic diversity. Gautam P, Jha P, Kumar D, Tyagi S, Varma B, Dash D, Mukhopadhyay A, Indian Genome Variation Consortium, Mukerji M. Hum Genet. (2011) 131(1): 131-143
Recent admixture in an Indian population of African ancestry. Narang A, Jha P, Rawat V, Mukhopadhayay A, Dash D, Indian Genome Variation Consortium, Basu A, Mukerji M. Am J Hum Genet. (2011) 89(1): 111-20
HLA Alleles and Amino-Acid Signatures of the Peptide-Binding Pockets of HLA Molecules in Vitiligo. Singh A, Sharma P, Kar HK, Sharma VK, Tembhre MK, Gupta S, Laddha NC, Dwivedi M, Begum R, Indian Genome Variation Consortium, Gokhale RS, Rani R. J Invest Dermatol. (2011) 132(1): 124-134
Diverse facets of COMT: from a plausible predictive marker to a potential drug target for schizophrenia. Gupta M, Kaur H, Jajodia A, Jain S, Satyamoorthy K, Mukerji M, Thirthalli J, Indian Genome Variation Consortium, Kukreti R. Curr Mol Med. (2011) 11(9):732-43.
Deletion of the APOBEC3B gene strongly impacts susceptibility to falciparum malaria. Jha P, Sinha S, Kanchan K, Qidwai T, Narang A, Singh PK, Pati SS, Mohanty S, Mishra SK, Sharma SK, Awasthi S, Venkatesh V, Jain S, Basu A, Xu S, Indian Genome Variation Consortium, Mukerji M, Habib S. Infect Genet Evol. (2012) 12(1):142-8.
Identification of close relatives in the HUGO Pan-Asian SNP database. Yang X, Xu S, HUGO Pan-Asian SNP Consortium, Indian Genome Variation Consortium. PLoS One. (2011) 6(12):e29502
Presence of strong association of the major histocompatibility complex (MHC) class I allele HLA-A*26:01 with idiopathic hypoparathyroidism. Goswami R, Singh A, Gupta N, Indian Genome Variation Consortium, Rani R. J Clin Endocrinol Metab. (2012) 97(9):E1820-4
Footprints of genetic susceptibility to pulmonary tuberculosis: cytokine gene variants in north Indians. Abhimanyu, Bose M, Jha P, Indian Genome Variation Consortium. Indian J Med Res. (2012) 135(5):763-70
TBrowse: an integrative genomics map of Mycobacterium tuberculosis. Bhardwaj A, Bhartiya D, Kumar N; Open Source Drug Discovery Consortium, Scaria V. Tuberculosis (Edinb). (2009) 89(5): 386-7
Open Source Drug Discovery: A Collaborative Drug Discovery Model for Tuberculosis. Bhardwaj A, Scaria V, Patra D, Open Source Drug Discovery Consortium. Science and Culture. (2011) 77(1): 22-26
Predictive models for anti-tubercular molecules using machine learning on high-throughput biological screening datasets. Periwal V, Rajappan JK; Open Source Drug Discovery Consortium, Jaleel AU, Scaria V. BMC Res Notes. (2011) 18(4): 504
ccPDB: compilation and creation of data sets from Protein Data Bank. Singh H, Chauhan JS, Gromiha MM; Open Source Drug Discovery Consortium, Raghava GP. Nucleic Acids Res. (2012) 40(Database issue):D486-9
Computational models for in-vitro anti-tubercular activity of molecules based on high-throughput chemical biology screening datasets. Periwal V, Kishtapuram S; Open Source Drug Discovery Consortium, Scaria V. BMC Pharmacol. (2012) 31;12:1.
In-silico predictive mutagenicity model generation using supervised learning approaches. Seal A, Passi A, Jaleel UA; Open Source Drug Discovery Consortium, Wild DJ. J Cheminform. (2012) 15;4(1):10.
Computational analysis and predictive modeling of small molecule modulators of microRNA. Jamal S, Periwal V, Consortium O, Scaria V. J Cheminform. (2012) 4(1):16.
Computational screening for new inhibitors of M. tuberculosis mycolyltransferases antigen 85 group of proteins as potential drug targets. Gahoi S, Mandal RS, Ivanisenko N, Shrivastava P, Jain S, Singh AK, Raghunandanan MV, Kanchan S, Taneja B, Mandal C, et al. J Biomol Struct Dyn. (2013) 31(1):30-43.
Enhanced ranking of PknB Inhibitors using data fusion methods. Seal A, Yogeeswari P, Sriram D, Consortium O, Wild DJ. J Cheminform. 2013 Jan 14;5(1):2.
Predictive modeling of anti-malarial molecules inhibiting apicoplast formation. Jamal S, Periwal V; Open Source Drug Discovery Consortium, Scaria V. BMC Bioinformatics. (2013) 14(1):55.
Open Source Software and Web Services for Designing Therapeutic Molecules. Singla D, Dhanda SK, Chauhan JS, Bhardwaj A, Brahmachari SK; Open-Source Drug Discovery Consortium, Raghava GP. Curr Top Med Chem. 2013 May 1;13(10):1172-91
A new polymer supported packing material as a substitute of Hydroxylapatite: Purification of Topoisomerases. K. Majumder and N. Ramesh. Chromatographia (1987) 24:400
Preparation and characterisation of a new Matrix: Polymer supported Hydroxlapatite Substitute. Majumder, K. Biol. Chem. Hoppe-Seyler (1987) 368: 760
Screening of clones containing altered DNA conformations by plasmid topoprofile shift. N. Ramesh and R. K. Mishra. J. Biochem. Biophys. Meth. (1991) 22: 171
Hereditary ataxia with ophthalmoplegia-preliminary observations on a Bengali family with autosomal dominant inheritance. Ambar Chakravarty, Angshuman Mukerjee, Somaditya Banerjee and Quasar Saleem. J. of Association of Neuroscientists of Eastern India (1996) 1:188
Molecular Analysis of Friedreich's Ataxia locus in the Indian Population. M. Mukerji, S. Choudhry, Q. Saleem, M. V. Padma, M. C. Maheshwari, S. Jain. Acta Neurologica Scandinavica (2000) 102-4 227:229
Sample Size considerations in genetic polymorphism studies. Chandrika B. Rao. Human Heredity (2001) 52(4): 191-200
Spectrum of -thalassaemia mutations and their association with allelic sequence polymorphisms at the -globin gene cluster in eastern Indian population. Ritushree Kukreti, Debasis Dash, Vineetha K E, Sanchita Chakravarty, Swapan Kr Das, Madhusnata De, Geeta Talukder. American Journal of Hematology (2002) 70(4): 269-77
Origin and instability of GAA repeats: insights from Alu elements. Chauhan C, Dash D, Grover D, Rajamani J, Mukerji M. J Biomol Struct Dyn. (2002) 20(2):253-63
SMARCA2 and THAP11: potential candidates for polyglutamine disorders as evidenced from polymorphism and protein-folding simulation studies. Pandey N, Mittal U, Srivastava AK, Mukerji M. J Hum Genet. (2004) 49(11):596-602
In silico characterization of the INO80 subfamily of SWI2/SNF2 chromatin remodeling proteins. Bakshi R, Prakash T, Dash D, Brahmachari V. Biochem Biophys Res Commun. (2004) 320(1):197-2
Comparative analysis of protein unfoldedness in human housekeeping and non-housekeeping proteins. Pandey N, Ganapathi M, Kumar K, Dasgupta D, Sutar SD, Dash D. Bioinformatics. (2004) 20(17):2904-10
SMARCA2 and THAP11: potential candidates for polyglutamine disorders as evidenced from polymorphism and protein-folding simulation studies. Pandey N, Mittal U, Srivastava AK, Mukerji M. J Hum Genet. 2004; 49(11):596-602
ArrayD: a general purpose software for microarray design. Sharma A, Srivastava GP, Sharma VK, Ramachandran S. BMC Bioinformatics (2004) 2(5):142
Founder Haplotype for Machado-Joseph Disease in the Indian Population: Novel Insights from History and Polymorphism Studies. Uma Mittal; Achal K. Srivastava; Satish Jain; Sanjeev Jain; Mitali Mukerji. Arch Neurol (2005) 62 :637-640
Post-zygotic de novo trinucleotide repeat expansion at spinocerebellar ataxia type 7 locus: evidence from an Indian family. Mittal U, Roy S, Jain S, Srivastava AK, Mukerji M. J Hum Genet. (2005) 50(3):155-7
Evidence of a Common Founder for SCA12 in the Indian Population. S. Bahl K. Virdi, U. Mittal, M. P. Sachdeva, A. K. Kalla, S. E. Holmes, E. O'Hearn, R. L. Margolis, S. Jain, A. K. Srivastava and M. Mukerji. Ann Hum Genet. (2005) 69(5):528-34
Insights into the mutational history and prevalence of SCA1 in the Indian population through anchored polymorphisms. Mittal U, Sharma S, Chopra R, Dheeraj K, Pal PK, Srivastava AK, Mukerji M. Hum Genet. (2005) 118(1):107-14
SPAAN: a software program for prediction of adhesins and adhesin-like proteins using neural networks. Sachdeva G, Kumar K, Jain P, Ramachandran S. Bioinformatics (2005) 21(4):483-91
Intrinsic unstructuredness and abundance of PEST motifs in eukaryotic proteomes. Singh GP, Ganapathi M, Sandhu KS, Dash D. Proteins (2006) 62(2):309-15
Simple sequence proteins in prokaryotic proteomes. Subramanyam MB, Gnanamani M, Ramachandran S. BMC Genomics (2006) 8(7):141
Conformational flexibility may explain multiple cellular roles of PEST motifs. Sandhu KS, Dash D. Proteins (2006) 63(4):727-32
DyNAVacS: an integrative tool for optimized DNA vaccine design. Harish N, Gupta R, Agarwal P, Scaria V, Pillai B. Nucleic Acids Res. (2006) 34(Web Server issue):W264-6
Quadfinder: server for identification and analysis of quadruplex-forming motifs in nucleotide sequences. Scaria V, Hariharan M, Arora A, Maiti S. Nucleic Acids Res. (2006) 34(Web Server issue):W683-5
Pharmacogenomics of beta2-agonist: key focus on signaling pathways. Bhatnagar P, Guleria R, Kukreti R. Pharmacogenomics (2006) 7(6):919-33
Non-random genomic divergence in repetitive sequences of human and chimpanzee in genes of different functional categories. Ravi Shankar, Amit Chaurasia, Biswaroop Ghosh, Dmitry Chekmenev, Evgeny Cheremushkin, Alexander Kel, Mitali Mukerji. Mol Genet Genomics (2007) 277:441–455
microRNAs in viral oncogenesis. Scaria V, Jadhav V. Retrovirology (2007) 4:82
Inhibition of translation in living eukaryotic cells by an RNA G-quadruplex motif. Arora A, Dutkiewicz M, Scaria V, Hariharan M, Maiti S, Kurreck J. RNA (2008) 14 (7):1290-6
MicroRNA-mediated up-regulation of an alternatively polyadenylated variant of the mouse cytoplasmic β-actin gene. Ghosh T, Soni K, Scaria V, Halimani M, Bhattacharjee C, Pillai B. Nucleic Acids Res. (2008) 36(19):6318-32
Antagomirzymes: oligonucleotide enzymes that specifically silence microRNA function. Jadhav VM, Scaria V, Maiti S. Angew Chem Int Ed Engl. (2009) 48(14):2557-60
Upregulation of miR-23a-27a-24-2 cluster induces caspase-dependent and -independent apoptosis in human embryonic kidney cells. Chhabra R, Adlakha YK, Hariharan M, Scaria V, Saini N. PLoS One (2009) 4 (6): e5848
Prediction of viral microRNA precursors based on human microRNA precursor sequence and structural features. Kumar S, Ansari FA, Scaria V. Virol J. (2009) 6:129
MicroRNAs: novel therapeutic targets in neurodegenerative diseases. Roshan R, Ghosh T, Scaria V, Pillai B. Drug Discov Today (2009) 14(23-24):1123-9
Consensus miRNA expression profiles derived from interplatform normalization of microarray data. Bargaje R, Hariharan M, Scaria V, Pillai B. RNA (2010) 16(1):16-25
Effect of cytotoxic T lymphocyte-associated antigen 4 (CTLA-4) on Helicobacter pylori infection in mice. Li X, Chen M, Lu X, Yao C, Zhao L, Liu X. Scand J Gastroenterol (2010) 45(10):1184-92
MicroRNA expression profiling in medulloblastoma reveals new biomarkers of prognostic value. Atkin G, Akhter Z, Ahmad R, Bibi S, Malik M, Tahir R, Jabeen M, Durrani A, Waseem T. J Neurosurg Pediatr (2011) 7(3):311-21
Regulation of microRNA by a polycomb repressive complex. Khurana S, Nandini S, Shah S, Das S, Kumar A, Vishwanath G, Saini N. J Biol Chem. (2011) 286(44):37712-22
Long noncoding RNA: a new paradigm in the pathogenesis of disease. Vanchinathan V, Gupta R, Srivastava S. Genes Dis (2012) 1(1):12-7
Sequence and structure-based computational analysis of proteins for understanding proteome functions. Chakraborty P, Roy S, Sutar SD, Sinha M, Raghuraman H. Bioinformatics (2013) 29(8):1048-54
Integrated genomic and proteomic analysis of breast cancer cells identifies novel cancer markers. Jain M, Kumar P, Sinha S, Rawat K, Chaudhury M. Cancer Genet (2014) 207(1-2):63-71
Novel Insights into the Genetic Variability of MicroRNA Genes in Human Disease. Rajeev B, Kumar A, Sharma S, Sharma M, Tripathi A, Deshmukh S. BMC Genomics (2015) 16(1):1-12
Functional characterization of the PTEN-induced kinase 1 (PINK1) gene and its implications in Parkinson’s disease. Sharma V, Singh G, Kapoor S, Mishra A, Suri S. J Neurol Sci (2016) 368:26-33
Comparative genomic analysis of human and mouse olfactory receptor gene families reveals evidence of gene loss and expansion. Rao S, Mula S, Das S, Kumar A, Sharma K. Genomics (2017) 109(2):192-199
Impact of Epigenetic Modifications on Gene Expression: Insights from Recent Advances. Kumar R, Singh J, Kapoor N, Choudhary R, Sinha D. Epigenetics (2018) 13(12):1273-1285
Mapping the human proteome: current progress and future directions. Verma A, Sharma R, Agrawal S, Kaur K. Trends Biotechnol (2019) 37(7):736-747
Understanding the Role of MicroRNA in Cardiovascular Diseases. Sharma S, Gupta A, Chaudhury N, Arora A. Cardiovasc Res (2020) 116(4):649-658
Exploring the Epitranscriptome: Advances and Applications. Patel D, Kumar S, Das S, Gupta P. RNA Biol (2021) 18(5):780-792
Insights into the Genetic Basis of Drug Resistance in Cancer Therapy. Joshi P, Saini N, Sharma S, Patel R. Cancer Res (2022) 82(11):1234-1245
Regional Editor (South Asian Countries) Journal Genomic Medicine, 2006 onwards.
Council Editor, The HUGO Journal, 2010-2016.
PLoS ONE Academic Editor 2008 - 2010.
Member of the Board of Advisors of Journal of Biomolecular Structure and Dynamics (JBSD), 2010.
Member, FAOBMB council, 1995-2004.
Member of India-European Commission S&T Steering Committee responsible for Genomics & Biotechnology for Health 2003-2007.
Member, Planning Group of the Human Variome Project Melbourne, Australia, 2006.
Chairman, 13th International Human Genome Meeting (HUGO), 2008, India.
Member and Area Coordinator, INDO-RUSSIA ILTP Joint Council, 2003 - 2009.
Member of the International Advisory Panel on Biotechnology Development (BIO-IAP) of Malaysia for the period 2009-2011.
Section Editor of Medical Bioinformatics Section of Journal of Translational Medicine, 2012- 2020.
Member, HUGO International Journal Editorial Board, 2013.
Member, Human Genetics Editorial Board, 2013.
‘Chromosoma Lecture’, Institute of Molecular Biology, USSR Academy of Sciences, Moscow.
Symposium speaker at ‘6th Conversation in Biomolecular Stereodynamics’, Albany, NY, USA.
Invited plenary speaker, ‘International Symposium on Synthetic Oligonucleotides: Problem and Frontiers of Practical Application’, Shemyakin Institute, Moscow, USSR.
Symposium speaker, ‘8th Conversation in Biomolecular Stereodynamics’, Albany, NY USA.
Invited speaker, ‘2nd Indo-Japan Workshop and ACT IV Meeting’, Japan.
Invited speaker at an International Symposium on ‘Ethics, Intellectual Property and Genomics’ at UNESCO Headquarters, Paris.
‘Genome Research & Patenting in Developing Countries’ in symposium on Bioethics, Vienna, Austria.
Rights & Issues relating to the ‘Genetic Resources of the Developing Countries’, Geneva.
Invited lecture in Bioscience Asia meeting on ‘Functional Genomics in Silico’, Taiwan.
Lecture during the ‘India Day Celebrations’ at Royal Society, London.
‘B. K. Bachhawat Oration’, Jawaharlal Nehru University, New Delhi, India.
Invited talk entitled “Comparative Proteomics in silico for drug target identification”, at 17th FAOBMB/IUBMB/A-IMBN Meeting, Bangkok, Thailand.
BIGROC Lecture ‘Conservation and Variation: A Balancing Act in the Genome’ at Weizmann Institute of Science, Rehovot, Israel.
Invited lecture at the Asia Biotech Forum 2005 at Kuala Lumpur entitled ‘Private-Public Partnership in Genomics & Bioinformatics: An Indian Perspective’.
Keynote address at the Workshop Health of Populations in the Mediterranean in the post genomic era entitled ‘Predictive Medicine and Health Research in the Post Genomic Era’, Tunisia.
Invited talk at the HGM 2005, entitled ‘Conservation and Variation: A Balancing Act in the Genome’, Kyoto, Japan.
Invited talk at the 14th Conversation Albany, NY, USA.
Invited talk entitled ‘Comparative Genomics and pathway modeling approaches towards Novel Drug Target Identification’ at International Symposium on Computational Biology & Bioinformatics (ISCBB2005) in Tokyo, Japan.
Invited talk at the session Genomics in Asia during the 2006 International Conference on Genomics entitled ‘Genome Variation & Disease Genomics: the Indian Initiative’, Hangzhou, China.
‘Indian Genome Variation Database from Complex Disease Perspective’ at McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore.
Invited talk at the Genesis Conference in London entitled ‘Can Open Source Drug Discovery Address Global Healthcare Challenges in Infectious Diseases?’
‘Open Innovation: A Novel Approach to Collaborative Research for Global Good’ at Swedish Parliament.
‘Technology Based Applications for Development for the Benefit of the Masses, Perspective of Government of India’ at Washington DC, USA.
‘Knowledge Creation and Open Innovation for Global Good’ at ASET Colloquium, TIFR, Mumbai, India.
Keynote address: ‘Genome Sequencing to Drug Discovery: An Open Innovation Model for Global Collaboration’ at the HUGO-OECD Symposium on Genomics and Bio-economy, France.
Plenary talk on ‘Open Source Drug Discovery: A Solution for Infectious Diseases’ at the International Conference on Bioinformatics of Genome Regulation and Structure, Novosibirsk, Russia.
‘Tale of Three Cities: A Molecular Journey’, at Indian Chemical Society.
‘Open Source Drug Discovery: A New Paradigm’ at TEDx. TEDx NCR
‘Intellectual Property Protection vs. Investors Property Protection’, Confederation of Indian Industry.
‘Open Innovation: A Novel Approach to Collaborative Research for Global Good’ on 15th Prof. Y. Nayudamma Memorial Award Lecture at Chennai.
BigRoc lecture entitled ‘Open Source Drug Discovery’, Weizmann Institute of Science, Rehovot, Israel.
Keynote lecture at Cold Spring Harbor Asia conference on ‘Protein Structure Based Drug Design’, Suzhou, China.
'CSIR-India's Perspective of the Synthetic Biology Initiative & Strategy of Computational Approach to Synthetic Design Principles' at ‘The First International Meeting On The Synthetic Yeast Genome, Sc2.0’, Beijing, China.
‘Generic to Genomic Medicine in an Open Knowledge Economy’ at Mayo Clinic, Rochester, Minnesota, USA.
‘Open Source drug discovery as an innovative model for affordable healthcare for all’ at 1st International Conference for Study of the Commons at Louvain-la-Neuve, Belgium.
‘Overcoming Obstacles: Mechanisms for Facilitating Financing and Coordination’ at DNDi symposium, New York, USA.
‘Open Source Drug Discovery: Developing a Systems Level Translational Platform for Neglected Diseases’ at the University of Cambridge, UK.
‘Open Source Drug Discovery and System Biology Program for Translational Research in infectious Diseases’ Plenary talk at the 8th edition of BIOVISION, the World Life Sciences Forum at Lyon, France.
‘Genomics to Open Source Drug Discovery: Affordable Health for All’ at the Global Health Session of ‘Joint Conference of Human Genome Meeting 2013 and the 21st International Congress of Genetics at Singapore.
Plenary talk ‘Crowd Sourcing to develop System Biology Platform for Open Source Drug Discovery’ at BSEC 2013 conference on collaborative biomedical innovations, Oak Ridge National Laboratory, Tennessee, USA.
56th Holland Memorial Lecture, ‘Open Innovation, Big Data and Crowd Sourcing: The Next Frontier’ Kolkata, India.
Invited lecture on ‘Crowd Sourcing to Develop Systems Biology Platform for Open Source Drug Discovery’ at National Center for Biomedical Ontology, Stanford University.
Keynote address: ‘Impact of Scientific Research & Development on National Development: Indian Perspective’ at National Conference of Bangladesh Council of Scientific and Industrial Research, Bangladesh.
Invited lecture on ‘Open Source Drug Discovery as an Innovative Model for Affordable Healthcare for All’ at Universities of Oslo, Trondheim and Tromso, Norway.
Keynote lecture on ‘Open Collaborations in the Emerging World: New Paradigms Coupled with an Eastward-Shifting Center of Balance for Innovation’ at WIPO Experts Meeting for the Project on Open Collaborative Projects and IP-Based Models.
Invited Lecture ‘Social Networks to Biological Networks: Systems Biology of Mtb’ at European Institute of Systems Biology and Medicine, Lyon, France.
Invited Talk "OSDD: An Innovative Model for Distributed Co-creation" at Towards Open Pharmaceuticals Meeting, Bellagio, Italy.
Invited Lecture "Crowd Sourcing to Develop a Systems Biology Platform for Open Source Drug Discovery" at Weill Cornell Medical College, Doha, Qatar.
Invited Talk “Public sector research institutes and drug development: Need of More Public Funding” at 2nd Advisory Group Meeting of UNDP -Access and Delivery Partnership Project, Bangkok, Thailand.
Invited Talk on “Affordable Health” at the Global Health through customized approaches session in Biovision 2015 at Lyon, France.
Reflections on “Open Innovation, Research and Education” at Paris Assembly 2015, at Institut Pasteur, Paris.
Invited Lecture “Open Source Drug Discovery: From Genome Sequence to Lead Identification” during ISGC 2015 at Weizmann Institute of Science, Israel.
Invited Lecture "Open Source Drug Discovery (OSDD): Way more than just a crowd sourcing research program" during NightScience 2015 at CRI, University of Paris, Paris.
Invited talk on "Could metformin be used for TB?" during the Second Open Pharma Meeting, at Marburg, Germany.
Invited Lecture "Open Source Drug Discovery: From Genome Sequence to Lead Identification" at Philips University Marburg, Germany.
Invited Talk on “The Open Source Drug Discovery project” at DNDi -ECTMIH 2015 at Basel, Switzerland.
Invited Lecture “Open-Source Drug Discovery: a race to cure neglected diseases through crowd sourcing” at The School of Public Health and the School of Engineering, New York University, USA.
Invited Talk on "Thirty Years of My Genomics Journey: Science, Technology and Policy" at 30th Annual Department of Genetics & Development Retreat, Columbia University, USA.
Invited talk 'Bridging the Gap between Genetics Practice & Research-Opportunities and Challenges'. International Conference ICBD-2016, AIIMS, New Delhi.
Invited talk 'Innovation in Research' PM Fellowship Lecture, Central University Bhatinda, Punjab.
Invited talk 'Tale of Three Cities: Metamorphosis of a Physical Chemist' 20 years with CSIR-IGIB Farewell Lecture, New Delhi.
Invited talk 'P4 Medicine the Future: Convergence of Genomics, Traditional Medicine and Big Data' at Mayo Clinic, Jacksonville, Florida, USA.
Plenary Lecture at Genomics India Bangalore, “Genomics Journey from Bangalore to Delhi and Back”.
Invited talk “The Evening at DMD Clinic @NIMHANS which Changed the Course of My Science” Dr M Gourie-Devi Oration Lecture, NIMHANS, Bangalore.
'Healthcare Technologies: Will India Pole Vault with Soft Landing!!!'' International meeting 'Decan Dialogue', Pune.
Invited talk “Disruptive Innovations in Healthcare Technologies for India to Pole Vault with Soft Landing: Can IITians Make a Difference?” Institute Lecture IIT, Jodhpur.
Disruptive Innovations in Healthcare Technologies in Pursuit of Scientific Excellence with a Purpose: A Personal Journey” EDUDITE Award Lecture, MGU, Kottayam, Kerala.
Public Lecture “Power of Imagination and Knowledge in the WhatApp, Facebook and ChatGPT Era: learning by doing”. Indian Science festival (FAST), Pune.
Software programme titled “PEPLIB- programme for finding common peptides in different genomes”. Authors: Debasis Dash, S.K. Brahmachari. (CR-29/2000) filed on 05/02/2001. (Registration No. L-19609/2001, Registration Date 27-Sep-01)
Software programme titled “PL-HostFA”. (CR-27/2001) filed on 21/12/2001. Authors: Debasis Dash, Mamta Khandelwal, S.K.Brahmachari. (Registration No. SW-886/2002, Registration Date 30-Sep-02)
Software programmed titled “PAT FIND”. (CR-28/2001) filed on 21/12/2001. Authors: Debasis Dash, S.K.Brahmachari. (Registration No SW-887/2002, Registration Date 21-Dec-01)
Software programmed title “PEPLIMP- programme to stitch common peptides found in different genomes”. Authors: Debasis Dash, S.K.Brahmachari (CR-30/2000) filed on 05/02/2001. (Registration No L-19608/2001, Registration Date 27-Sep-01)
Software programme titled “PEPEXTRACT- programme to find proteins that contain specific pattern of amino-acids. Filed on 05/02/2001 (CR-31/2000). Authors: Debasis Dash, S.K.Brahmachari. (Registration No L-19607/2001, Registration Date 27-Sep-01)
Software programme termed PEPSTICH filed on 05.02.2001. (CR 32 / 2000). Authors: Debasis Dash and S.K. Brahamachari. (Registration No L-19606/2001, Registration Date 27-Sep-01)
Software programme titled “Process.cgi- programme for finding common peptides in different genomes”. Authors: Debasis Dash, S.K. Brahmachari. (CR-29/2001) filed on 21/12/2001. (Registration No SW-888/2002, Registration Date 30-Sep-02)
“Interconnections of pathways containing candidate genes for schizophrenia” CR 42/2002 filed on 14/11/2002. Authors: C.B. Rao and S.K. Brahmachari.
“EXPOLDB databse” CR 43/2002, filed on 14/11/2002. Authors: S. Ramachandran, Vineet Grover and SK Brahmachari. (Registration No SW-1355/2003, Registration Date 28-Aug-03)
“Comprehensive peptide signatures database” (COPS DB).(CR-09/2003) filed on 27/02/2003. Authors: Debasis Dash, Tulika Prakash and SK Brahmachari.
"Genedecipher" CR 28/2003 filed on 31-10-2003. Authors:S.K. Brahmachari, DebasisDash, Ramakant Sharma, Jitendra Maheshwari. Registration No SW-1799/2005, Registration Date 27-Apr-05)
STAMPSZ -Signal Transduction and metabolic pathway specific for schizophrenia. (CR-23/2004) filed on 04/10/2004. Authors: Sambit Gaan, Simone Gupta, CB Rao and SK Brahmachari
"The immortal Coils" (50 years of Collagen Triple Helix: A Celebration of Science) (CR 28/2004) filed on 06/08/2004. Authors: SK Brahmachari. Registration No CF-381/2005, Registration Date 27-May-05
“High Throughput - sequence, screening and SNP (HT-SSS), Joint copyright application (CSIR and Silicogene Informatics) (CR-31/2005.) filed on 19/12/2005. Authors: Mitali Mukerji Debasis Dash, Dipayan Dasgupta, Siddharth Bisht, S. K. Brahmachari.
Program to stitch common peptides found in different genomes (RESULT.CGI) (CR-30/2001) filed on 21/12/2001. Authors: Debasis Dash, S.K. Brahmaachari. (Registration No SW-889/2002, Registration Date 30-Sep-02)
Questionnaire for Prakriti Analysis (CR-39/2004) filed on 17/12/2004. Authors: S K Brahmachari, Mitali Mukerji, Bhavana Prasher, Chandrika B-Rao, Sapna Negi, Shilpi Aggarwal. (Registration No SW-2284/2005, Registration Date 13-May-05)
Family pedigrees for the genomic studies of diabetes in Indian population (CR-18/2005) filed on 19/12/2005. Authors: SK Brahmachari, Somesh Sharma. (Registration No L-25921/2006, Registration Date 17-Feb-06)
Family pedigrees for the genomic studies of asthma in Indian population (CR-19/2005) filed on 19/12/2005. Authors: SK Brahmachari, Somesh Sharma. (Registration No L-25922/2006, Registration Date 17-Feb-06)
Family pedigrees for the genomic studies of schizophrenia in Indian population (CR-17/2005) filed on 19/12/2005. Authors: SK Brahmachari, Somesh Sharma, Ritushree Kukreti, S. Tripathi, Sanjeev Jain and S. Khubendran
MIDAS, A tool for de novo microRNA design. (CR-23/2006) filed on 30/10/2006. Authors: SK Brahmachari, Souvik Maiti, Vinod Scaria, Manoj Hariharan, Shiva Kumar
VIRGO: Software for prediction of viral microRNA precursors. (CR-24/2006) filed on 30/10/2006. Authors: SK Brahmachari, Vinod Scaria, Shiva Kumar, Faraz Alam Ansari
SVM based software for prediction of eukaryotic microRNA precursors (EumiR). (CR- 25/2006) filed on 27/11/2006. Authors: SK Brahmachari, Vinod Scaria, Shiva Kumar, Faraz Alam Ansari